Mapped reads for uncultivated Ruminiclostridium bacterium UBA9863 gen... - SRA

SRX3572568: Mapped reads for uncultivated Ruminiclostridium bacterium UBA9863 genome recovered from ERX1109758
1 ILLUMINA (Illumina HiSeq 2000) run: 173,040 spots, 42.6M bases, 22Mb downloads

Design: Reads from ERX1109758 were mapped with BWA-MEM v0.7.12-r1039 to a metagenome assembly produced with CLC v4.4.1. The resulting mapping file was then pruned to the contigs comprising the UBA9863 genome.

Submitted by: University of Queensland

Study: Collection of 3,087 bacterial metagenome-assembled genomes recovered from metagenomes available from the Sequence Read Archive.

PRJNA417962 • SRP130174 • All experiments • All runs

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Collection of 3,087 bacterial metagenome-assembled genomes (MAGs) recovered from metagenomes available from the Sequence Read Archive. These MAGs comprise part of the data set used to define a standardised bacterial taxonomy based on a concatenated protein phylogeny that conservatively removes polyphyletic groups and normalises ranks based on relative evolutionary divergence.

Sample: Uncultivated Ruminiclostridium bacterium UBA9863 genome recovered from ERX1109758

SAMN08017418 • SRS2843537 • All experiments • All runs

Organism: Ruminiclostridium sp.

Library:

Name: UBA9863_library

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 173,040 spots, 42.6M bases, 22Mb

Run	# of Spots	# of Bases	Size	Published
SRR6482916	173,040	42.6M	22Mb	2018-03-05

ID:: 4958070

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Sequence Read Archive

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